Level of Inbreeding in Yorkshire, Landrace, and Hampshire Breeds D. L. Lofgren and T. S. Stewart Department of Animal Sciences Introduction Inbreeding is a measure of the common ancestry of the parents of an animal, and ranges from 0 to 1 (or 100%). If a sire and dam are related (have genes in common through common ancestors), then their progeny are inbred. The level of inbreeding depends on how strongly related the parents are. Inbred animals are more homozygous than noninbred animals; that is, they have the same alleles (form of the gene) on both chromosomes for a locus (gene location). High levels of inbreeding generally will result in decreased performance, particularly for reproductive traits. The occurrence of these problems tends to become apparent at levels of inbreeding above 15%, and becomes progressively more severe as inbreeding increases. Breeders who are trying to improve their herds with performance testing and Expected Progeny Deviations (EPD) often find that the best animals are related to one another. As these superior animals are mated to each other, average inbreeding in the herds will tend to increase, and it eventually may become difficult for the breeders to avoid high levels of inbreeding. This study examined the amount of inbreeding, and the change in inbreeding over time, in the Yorkshire, Landrace, and Hampshire breeds. Data Pedigree information in the analysis was for animals that had been performance tested, with records submitted to the STAGES (Swine Testing And Genetic Evaluation System) program by late 1994. Animals included sows with STAGES litter records, their ancestors (parents, grandparents, and great-grandparents), and ancestors of pigs with STAGES growth records. Inbreeding was calculated for all animals in the data set. This was summarized overall, and by the year of birth of the animal. Results Table 1 contains the means and ranges for inbreeding in the three breeds. Most animals were not inbred. As a result, the means were low, ranging from 2.00% for Hampshires to 3.13% for Landrace. However, some animals were highly inbred. The maximum inbreeding of an animal was at least 44% for all breeds. This level of inbreeding occurred with several generations of full-sib matings, or several generations of parent-offspring matings, and was most likely the result of deliberate management decisions to produce inbred offspring. The change in inbreeding over time for Yorkshires is in Figure 1. Inbreeding has increased, reaching a peak of 3.7% in 1991, and then decreasing to 3.0% in 1993. The decreasing trend is good. However, it will be a challenge for Yorkshire breeders to keep inbreeding this low in the future. A few sires with high EPDs have had a large influence in the breed. They have sired a large number of litters themselves, and now have sons and grandsons producing litters. Some breeders may find it hard to avoid inbreeding while maintaining selection pressure in their herds. The trend for Landrace is in Figure 2. Inbreeding has continued to increase over time, to a maximum of 5.4% in 1993. Although not very high, this is still higher than the other breeds, and continues to increase. The Landrace breed has a relatively small number of animals, which makes it more difficult to avoid inbreeding. There may be problems with inbreeding in the future for Landrace, unless breeders are careful. The change in inbreeding for Hampshires is in Figure 3. Inbreeding has increased over time, reaching a peak of 3.0% in 1991, and then decreasing to 2.3% in 1993. This decrease is good, and Hampshires have the lowest inbreeding of the three breeds. Recently, Hampshire breeders have been able to identify the superior sires in the breed. If these become heavily used, there may be more inbreeding in the future. However, for now, Hampshire breeders are doing a good job of avoiding inbreeding. Implications Inbreeding levels are currently low for all breeds, and decreasing for Yorkshires and Hampshires. However, breeders need to be aware of potential problems with inbreeding. They should continue to avoid mating close relatives, so reproductive performance will not be affected. Breeders should search for unrelated sources of superior genetics to use in their herd improvement programs. Table 1. Average inbreeding % for the three breeds. Breed Number Mean Minimum Maximum Yorkshire 100,940 2.76 0 50.00 Landrace 17,509 3.13 0 46.09 Hampshire 33,069 2.00 0 44.53 Figure 1. Average inbreeding by year of birth for Yorkshires. Figure 2. Average inbreeding by year of birth for Landrace. Figure 3. Average inbreeding by year of birth for Hampshires.